Abbaspour, S., Nowruzi, B. & Hamdi, S.M. 2020. Optimizing the cultivation conditions of Fischerella sp. SH. A Cyanobacterium for maximizing polysaccharide production with antibacterial activity. Biological Journal of Microorganisms 9(34): 23–53.
Anand, N., Thajuddin, N. & Dadheech, P.K. 2019. Cyanobacterial Taxonomy: Morphometry to Molecular Studies. Chapter 3. Pp. 43–64. In: Mishra, A.K., Tiwari, D.N. & Rai, A.V. (eds). Cyanobacteria. Academic Press.
Aráoz, R., Nghiêm, H.O., Rippka, R., Palibroda, N., de Marsac, N.T. & Herdman, M. 2005. Neurotoxins in axenic oscillatorian cyanobacteria: coexistence of anatoxin-a and homoanatoxin-a determined by ligand-binding assay and GC/MS. Microbiology 151(4): 1263–1273.
Berrendero Gómez, E., Johansen, J.R., Kaštovský, J., Bohunická, M. & Čapková, K. 2016. Macrochaete gen. nov. (Nostocales, Cyanobacteria), a taxon morphologically and molecularly distinct from Calothrix. Journal of Phycology 52(4): 638–655.
Bohunická, M., Pietrasiak, N., Johansen, J.R., Gómez, E.B., Hauer, T., Gaysina, L.A. & Lukešová, A. 2015. Roholtiella, gen. nov. (Nostocales, Cyanobacteria)- a tapering and branching cyanobacteria of the family Nostocaceae. Phytotaxa 197(2): 84–103.
Boyer, S.L., Johansen, J.R., Flechtner, V.R. & Howard, G.L. 2002. Phylogeny and genetic variance in terrestrial Microcoleus (cyanophyceae) species based on sequence analysis of the 16s rrna gene and associated 16s-23s its region 1. Journal of Phycology 38(6): 1222–1235.
Brito, A., Ramos, V., Mota, R., Lima, S., Santos, A., Vieira, J., Vieira, C.P., Kaštovský, J., Vasconcelos, V.M. & Tamagnini, P. 2017. Description of new genera and species of marine cyanobacteria from the Portuguese Atlantic coast. Molecular Phylogenetics and Evolution 111: 18–34.
Cadel-Six, S., Peyraud-Thomas, C., Brient, L., De Marsac, N.T., Rippka, R. & Mejean, A. 2007. Different genotypes of anatoxin-producing cyanobacteria coexist in the Tarn River, France. Applied and Environmental Microbiology 73(23): 7605–7614.
Cai, F., Yang, Y., Wen, Q. & Li, R. 2018. Desmonostoc danxiaense sp. nov. (Nostocales, Cyanobacteria) from Danxia mountain in China based on polyphasic approach. Phytotaxa 367(3): 233–244.
Furey, A., Crowley, J., Shuilleabhain, A.N., Skulberg, O.M. & James, K.J. 2003. The first identification of the rare cyanobacterial toxin, homoanatoxin-a, in Ireland. Toxicon 41(3): 297–303.
Galhano, V., De Figueiredo, D.R., Alves, A., Correia, A., Pereira, M.J., Gomes-Laranjo, J. & Peixoto, F. 2011. Morphological, biochemical and molecular characterization of Anabaena, Aphanizomenon and Nostoc strains (Cyanobacteria, Nostocales) isolated from Portuguese freshwater habitats. Hydrobiologia 663(1): 187–203.
González‐Resendiz, L., Johansen, J.R., Escobar‐Sánchez, V., Segal‐Kischinevzky, C., Jiménez‐García, L.F. & León‐Tejera, H. 2018. Two new species of Phyllonema (Rivulariaceae, Cyanobacteria) with an emendation of the genus. Journal of Phycology 54(5): 638–652.
Gupta, S.K., Padmanabhan, B.R., Diene, S.M., Lopez-Rojas, R., Kempf, M., Landraud, L. & Rolain, J.M. 2014. ARG-ANNOT, a new bioinformatic tool to discover antibiotic resistance genes in bacterial genomes. Antimicrobial Agents and Chemotherapy 58(1): 212–220.
Hentschke, G.S., Johansen, J.R., Pietrasiak, N., Fiore, M.D.F., Rigonato, J., Sant’Anna, C.L. & Komarek, J. 2016. Phylogenetic placement of Dapisostemon gen. nov. and Streptostemon, two tropical heterocytous genera (Cyanobacteria). Phytotaxa 245(2): 129–143.
Hosseini, N., Akhavan, A. & Nowruzi, B. 2019. Detection and relation of polyketide synthase (PKSs) genes with antimicrobial activity in terrestrial Cyanobacteria of Lavasan. Iranian Journal of Medical Microbiology 12(6): 419–431.
Iteman, I., Rippka, R., de Marsac, N.T. & Herdman, M. 2000. Comparison of conserved structural and regulatory domains within divergent 16S rRNA-23S rRNA spacer sequences of cyanobacteria The GenBank accession numbers for the sequences reported in this paper are AF180968 and AF180969 for ITS-L and ITS-S, respectively. Microbiology 146(6): 1275–1286.
Jahodářová, E., Dvořák, P., Hašler, P., Holušová, K. & Poulíčková, A. 2018. Elainella gen. nov.: a new tropical cyanobacterium characterized using a complex genomic approach. European Journal of Phycology 53(1): 39–51.
Jenke-Kodama, H., Börner, T. & Dittmann, E. 2006. Natural biocombinatorics in the polyketide synthase genes of the actinobacterium Streptomyces avermitilis. PLoS Computational Biology 2(10): 1210–1218.
Johansen, J.R., Strunecký, O., Bohunická, M., Čapková, K.Č., Raabová, L., Dvořák, P. & Komárek, J. 2017. A revision of the genus Geitlerinema and a description of the genus Anagnostidinema gen. nov. (Oscillatoriophycidae, Cyanobacteria). Fottea 17(1): 114–126.
Jafari Porzani, S., Konur, O. & Nowruzi, B. 2021. Cyanobacterial natural products as sources for antiviral drug discovery against COVID-19. Journal of Biomolecular Structure and Dynamics. Pp. 1–17.
Komárek, J. 2020. Quo vadis, taxonomy of cyanobacteria. Fottea 20(1): 104–110.
Komárek, J. & Anagnostidis, K. 1989. Modern approach to the classification system of Cyanophytes
4-Nostocales. Archiv für Hydrobiologie. Supplementband. Monographische Beiträge 82(3): 247–345.
Krienitz, L., Dadheech, P.K. & Kotut, K. 2013. Mass developments of the cyanobacteria Anabaenopsis and Cyanospira (Nostocales) in the soda lakes of Kenya: ecological and systematic implications. Hydrobiologia 703(1): 79–93.
Liu, L., Jokela, J., Wahlsten, M., Nowruzi, B., Permi, P., Zhang, Y.Z., Xhaard, H., Fewer, D.P. & Sivonen, K. 2014. Nostosins, trypsin inhibitors isolated from the terrestrial cyanobacterium Nostoc sp. strain FSN. Journal of Natural Products 77(8): 1784–1790.
León-Tejera, H.P., Gonzalez-Resendiz, L., Johansen, J.R., Segal-Kischinevsky, C.L.A.U.D.I.A., Escobar, V. & Lois, L.A. 2016. Phylogenetic position reevaluation of Kyrtuthrix and description of a new species K. huatulcensis from Mexico’s Pacific coast. Phytotaxa 278(1): 1–18.
Mahansaria, A.P., Jaisankar, P. & Mukherjee, J. 2018. Oxynemaaestuarii sp. nov. (Microcoleaceae) isolated from an Indian mangrove forest. Phytotaxa 374(1): 24–40.
Martins, M.D., Rigonato, J., Taboga, S.R. & Branco, L.H.Z. 2016. Proposal of Ancylothrix gen. nov., a new genus of Phormidiaceae (Cyanobacteria, Oscillatoriales) based on a polyphasic approach. International Journal of Systematic and Evolutionary Microbiology 66(6): 2396–2405.
Méjean, A., Peyraud-Thomas, C., Kerbrat, A.S., Golubic, S., Pauillac, S., Chinain, M. & Laurent, D. 2010. First identification of the neurotoxin homoanatoxin-a from mats of Hydrocoleum lyngbyaceum (marine cyanobacterium) possibly linked to giant clam poisoning in New Caledonia. Toxicon 56(5): 829–835.
Mikalsen, B., Boison, G., Skulberg, O.M., Fastner, J., Davies, W., Gabrielsen, T.M., Rudi, K. & Jakobsen, K.S. 2003. Natural variation in the microcystin synthetase operon mcyABC and impact on microcystin production in microcystis strains. Journal of Bacteriology 185(9): 2774–2785.
Moustafa, A., Loram, J.E., Hackett, J.D., Anderson, D.M., Plumley, F.G. & Bhattacharya, D. 2009. Origin of saxitoxin biosynthetic genes in cyanobacteria. PloS One 4(6): 1–10.
Nowruzi, B. & Soares, F. 2021. Alborzia kermanshahica gen. nov., sp. nov. (Chroococcales, Cyanobacteria), isolated from paddy fields in Iran. International Journal of Systematic and Evolutionary Microbiology 71(6): 1–13.
Nowruzi, B. & Porzani, S.J. 2021. Toxic compounds produced by cyanobacteria belonging to several species of the order Nostocales: A review. Journal of Applied Toxicology 41(4): 510–548.
Nowruzi, B. & Lorenzi, A.S. 2021a. Production of the neurotoxin homoanatoxin-a and detection of a biosynthetic gene cluster sequence (anaC) from an Iranian isolate of Anabaena. South African Journal of Botany 139: 300–305.
Nowruzi, B. & Lorenzi, A.S. 2021b. Characterization of a potentially microcystin-producing Fischerella sp. isolated from Ajigol wetland of Iran. South African Journal of Botany 137: 423–433.
Nowruzi, B. & Shalygin, S. 2021. Multiple phylogenies reveal a true taxonomic position of Dulcicalothrix alborzica sp. nov. (Nostocales, Cyanobacteria). Fottea 21(2), 1–X. DOI: 10.5507/fot.2021.008 (In Press).
Nowruzi, B., Sarvari, G. & Blanco, S. 2020a. The cosmetic application of cyanobacterial secondary metabolites. Algal Research 49: 1–14.
Nowruzi, B., Sarvari, G. & Blanco, S. 2020b. Applications of Cyanobacteria in Biomedicine. Pp. 441–454. In: Ko-nur, O. (ed.). Handbook of Algal Science, Technology and Medicine. Academic Press, London.
Nowruzi, B. 2020. Culturing of aquatic and terrestrial cyanobacteria. Research in Karyotic Cell and Tissue 1(1): 34–44.
Nowruzi, B. & Blanco, S. 2019. In silico identification and evolutionary analysis of candidate genes involved in the biosynthesis methylproline genes in cyanobacteria strains of Iran. Phytochemistry Letters 29: 199–211.
Nowruzi, B., Wahlsten, M. & Jokela, J. 2019a. A report on finding a new peptide aldehyde from cyanobacterium Nostoc sp. Bahar m by lc-ms and marfey’s analysis. Iranian Journal of Biotechnology 17(2): 71–78.
Nowruzi, B., Akhavan Sepahi, A. & Soltani Savoji, G.S. 2019b. Genetic analysis of nonribosomal peptide synthesis genes (NRPSs) in natural product biosynthesis of the cyanobacterial strains of Lavasan Lake. Biological Journal of Microorganisms 8(30): 27–54.
Nowruzi, B., Haghighat, S., Fahimi, H. & Mohammadi, E. 2018a. Nostoc cyanobacteria species: a new and rich source of novel bioactive compounds with pharmaceutical potential. Journal of Pharmaceutical Health Services Research 9(1):
5–12.
Nowruzi, B., Fahimi, H. & Ordodari, N. 2018b. Molecular phylogenetic and morphometric evaluation of Calothrix sp. N42 and Scytonema sp. N11. Rostaniha 18(2): 210–221.
Nowruzi, B., Blanco, S. & Nejadsattari, T. 2018c. Chemical and molecular evidences for the poisoning of a duck by anatoxin-a, nodularin and cryptophycin at the coast of lake Shoormast (Mazandaran province, Iran). International Journal on Algae 20(4): 359–376.
Nowruzi, B., Fahimi, H., Ordodari, N. & Assareh, R. 2017a. Genetic analysis of polyketide synthase and peptide synthase genes of cyanobacteria as a mining tool for new pharmaceutical compounds. Journal of Pharmaceutical & Health Sciences 5(2): 139–150.
Nowruzi, B., Khavari-Nejad, R.A., Nejadsattari, T., Sivonen, K. & Fewer, D. 2017b. A proposal for the unification of two cyanobacterial strains of Nostoc as the same species. Rostaniha 17(2):
161–172.
Nowruzi, B., Khavari-Nejad, R.A., Sivonen, K., Kazemi, B., Najafi, F. & Nejadsattari, T. 2013. Identification and toxigenic potential of a cyanobacterial strain (Stigomena sp.). Progress in Biological Sciences 3(1): 79–85.
Nowruzi, B., Khavari-Nejad, R.A., Sivonen, K., Kazemi, B., Najafi, F. & Nejadsattari, T. 2012. Identification and toxigenic potential of a Nostoc sp. Algae 27(4): 303–313.
Osorio-Santos, K., Pietrasiak, N., Bohunická, M., Miscoe, L.H., Kováčik, L., Martin, M.P. & Johansen, J.R. 2014. Seven new species of Oculatella (Pseudanabaenales, Cyanobacteria): taxonomically recognizing cryptic diversification. European Journal of Phycology 49(4): 450–470.
Prabha, R. & Singh, D.P. 2019. Cyanobacterial phylogenetic analysis based on phylogenomics approaches render evolutionary diversification and adaptation: an overview of representative orders. Biotech 9(3): 1–16.
Price, G.D., Badger, M.R., Woodger, F.J. & Long, B.M. 2008. Advances in understanding the cyanobacterial CO2-concentrating-mechanism (CCM): functional components, Ci transporters, diversity, genetic regulation and prospects for engineering into plants. Journal of Experimental Botany 59(7): 1441–1461.
Rajabpour, N., Nowruzi, B. & Ghobeh, M. 2019. Investigation of the toxicity, antioxidant and antimicrobial activities of some cyanobacterial strains isolated from different habitats. Acta Biologica Slovenica 62(2): 3–14.
Rantala-Ylinen, A., Känä, S., Wang, H., Rouhiainen, L., Wahlsten, M., Rizzi, E., Berg, K., Gugger, M. & Sivonen, K. 2011. Anatoxin-a synthetase gene cluster of the cyanobacterium Anabaena sp. strain 37 and molecular methods to detect potential producers. Applied and Environmental Microbiology 77(20): 7271–7278.
Řeháková, K., Johansen, J.R., Casamatta, D.A., Xuesong, L. & Vincent, J. 2007. Morphological and molecular characterization of selected desert soil cyanobacteria: three species new to science including Mojavia pulchra gen. et sp. nov. Phycologia 46(5): 481–502.
Shalygin, S., Pietrasiak, N., Gomez, F., Mlewski, C., Gerard, E. & Johansen, J.R. 2018. Rivularia halophila sp. nov. (Nostocales, Cyanobacteria): the first species of Rivularia described with the modern polyphasic approach. European Journal of Phycology 53(4): 537–548.
Sihvonen, L.M., Lyra, C., Fewer, D.P., Rajaniemi-Wacklin, P., Lehtimäki, J.M., Wahlsten, M. & Sivonen, K. 2007. Strains of the cyanobacterial genera Calothrix and Rivularia isolated from the Baltic Sea display cryptic diversity and are distantly related to Gloeotrichia and Tolypothrix. FEMS Microbiology Ecology 61(1): 74–84.
Szöllősi, G.J., Boussau, B., Abby, S.S., Tannier, E. & Daubin, V. 2012. Phylogenetic modeling of lateral gene transfer reconstructs the pattern and relative timing of speciations. Proceedings of the National Academy of Sciences 109(43): 17513–17518.
Taton, A., Grubisic, S., Brambilla, E., De Wit, R. & Wilmotte, A. 2003. Cyanobacterial diversity in natural and artificial microbial mats of Lake Fryxell (McMurdo Dry Valleys, Antarctica): a morphological and molecular approach. Applied and Environmental Microbiology 69(9): 5157–5169.
Tillett, D., Parker, D.L. & Neilan, B.A. 2001. Detection of toxigenicity by a probe for the microcystin synthetase. A gene (mcyA) of the cyanobacterial genus Microcystis: comparison of toxicities with 16S rRNA and phycocyanin operon (phycocyanin intergenic spacer) phylogenies. Applied and Environmental Microbiology 67(6): 2810–2818.
Vaz, M.G.M.V., Genuario, D.B., Andreote, A.P.D., Malone, C.F.S., Sant’Anna, C.L., Barbiero, L. & Fiore, M.F. 2015. Pantanalinema gen. nov. and Alkalinema gen. nov.: novel pseudanabaenacean genera (Cyanobacteria) isolated from saline-alkaline lakes. International Journal of Systematic and Evolutionary Microbiology 65(1): 298–308.
Villanueva, C.D., Garvey, A.D., Hašler, P.E.T.R., Dvořák, P.E.T.R., Poulíčková, A.L.O.I.S.I.E., Norwich, A.R. & Casamatta, D.A. 2019. Descriptions of Brasilonema geniculatum and Calothrix dumus (Nostocales, Cyanobacteria): two new taxa isolated from cemetery tombstones. Phytotaxa 387(1): 1–20.
Werner, V.R., Laughinghouse IV, H.D., Fiore, M.F., Sant'Anna, C.L., Hoff, C., de Souza Santos, K.R., Neuhaus, E.B., Molica, R.J.R., Honda, R.Y. & Echenique, R.O. 2012. Morphological and molecular studies of Sphaerospermopsis torques-reginae (Cyanobacteria, Nostocales) from South American water blooms. Phycologia 51(2): 228–238.
Wood, S.A., Selwood, A.I., Rueckert, A., Holland, P.T., Milne, J.R., Smith, K.F., Smits, B., Watts, L.F. & Cary, C.S. 2007. First report of homoanatoxin-a and associated dog neurotoxicosis in New Zealand. Toxicon 50(2): 292–301.
Zapomělová, E., Řeháková, K., Jezberová, J. & Komárková, J. 2010. Polyphasic characterization of eight planktonic Anabaena strains (Cyanobacteria) with reference to the variability of 61 Anabaena populations observed in the field. Hydrobiologia 639(1): 99–113.
Zhaxybayeva, O., Gogarten, J.P., Charlebois, R.L., Doolittle, W.F. & Papke, R.T. 2006. Phylogenetic analyses of cyanobacterial genomes: quantification of horizontal gene transfer events. Genome Research 16(9): 1099–1108.
Zuker, M. 2003. Mfold web server for nucleic acid folding and hybridization prediction. Nucleic acids Research 31(13): 3406–3415.
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